Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKQEMMEIVQQKQLAPKIFEMTLKGDLVKEMQQPGQFLHILVPRADLLLRRPISLNHIDHETNTCRIIYRVEGEGTRVFSTLSAGDH-LDVMGPLGNGFDLSNLHTGDEVFIIGGGIGVPPLYELSKQLVEKGIKPTHFLGFATHEVVYYEKEFNRLG-ETRIATDDGTYGMHGNVGNLLL-----GTKTEPTAVFACGSNGLLKTVEQLFSSHQ-NVQLSLESRMACGIGACYACVCHTPEDETGTKSVKVCDEGPIFKIGEVII 5JFC Chain:S ((7-249)) ----MFKILRKERLAPGINLFEIESPRIAKHAKPGQFVMIRLHEKG--ERIPLTIADVDISKGSITIVAQEVGKTTRELGTYEAGDYILDVLGPLGKP---SHIDYFGTVVMIGGGVGVAEIYPVAKAMKEKGNYVISILGFRTKDLVFWEDKLRSVSDEVIVTTNDGSYGMKGFTTHALQKLIEEGRKID--LVHAVGPAIMMKAVAELTKPYGIKTVASLNPIMVDGTGMCGACRV-----TVGGEVKFACVDGPEF-------

General information: TITO was launched using: RESULT: Template: 5JFC.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain S - contact count / total energy / energy per contact / energy per residue : 1323 -87895 -66.44 -374.02 target 2D structure prediction score : 0.61 Monomeric hydrophicity matching model chain S : 0.74 3D Compatibility (PKB) : -66.44 2D Compatibility (Sec. Struct. Predict.) : 0.61 1D Compatibility (Hydrophobicity) : 0.74 QMean score : 0.458

(partial model without unconserved sides chains): PDB file : Tito_5JFC.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5JFC-query.scw PDB file : Tito_Scwrl_5JFC.pdb: