Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMGKNRVWVEGTIVAALAMVLSLIPIQIGSSFSISLGQIPLTLFALRRGTKAGMLAGFIWGILHFPLGQVYYLSVVQVLIEYPIAYTFAGAAGLMASNVQKGYVDDNTKQIRKS-IVFGALIGALSRYFWHFIAGVVFWGAYALWGMNSWLFSFVMNGASGLSTAIVTIIVLLGIQQTTPSIFVPDKRQEL
4N4D Chain:A ((9-181))----RLLTEIAFMAALAFIISLIPNTVYGWIIVEIACIPILLLSLRRGLTAGLVGGLIWGILSMITGHAYILSLSQAFLEYLVAPVSLGIAGLF---------RQKTAPLKLAPVLLGTFVAVLLKYFFHFIAGIIFWSQYAWKGWGAVAYSLAVNGISGILTAIAAFVILIIFVKKFPKLFIHSN----


General information:
TITO was launched using:
RESULT:

Template: 4N4D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 786 -143456 -182.51 -834.04
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -182.51
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.332

(partial model without unconserved sides chains):
PDB file : Tito_4N4D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4N4D-query.scw
PDB file : Tito_Scwrl_4N4D.pdb: