Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MLRTEQLGFWYQDPQDALYKDVELNFEAGKMYAILGASGSGKTTFLSLISGLDAPKEGKVYYQDRSLN--KIGLRSYRKNDVSIIFQAYNLLPYLSALDNV-IAAMEITKTKQENYRQVALDRLARVGIDEILAKKQ--VTKLSGGQQQRVAIVRAICCEHQLIVADEPTGNLDETTSQDIVKLFQEIAHEQNRCIIIVTHEIEVAKSCDEVFELKNKKFQKIEV 4YMU Chain:J ((16-204)) -----------------VLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGEVFIDGVKINNGKVNINKVRQK-VGMVFQHFNLFPHLTAIENITLAPVKVKKMNKKEAEELAVDLLAKVGL---LDKKDQYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQLANE-GMTMVVVTHEMGFAREVGD--------------

General information: TITO was launched using: RESULT: Template: 4YMU.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain J - contact count / total energy / energy per contact / energy per residue : 843 -4863 -5.77 -26.43 target 2D structure prediction score : 0.64 Monomeric hydrophicity matching model chain J : 0.83 3D Compatibility (PKB) : -5.77 2D Compatibility (Sec. Struct. Predict.) : 0.64 1D Compatibility (Hydrophobicity) : 0.83 QMean score : 0.533

(partial model without unconserved sides chains): PDB file : Tito_4YMU.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4YMU-query.scw PDB file : Tito_Scwrl_4YMU.pdb: