Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMYAIITYLLTRFTAIFHYVKTCQDMGKAKEKNSL--AETPYNPSSPYSSTKAGSDLLVKAWVRSFGLRATISNCSNNYGPYQHIEKFIPRQVTNILSGIRPKLYGEGKNVRDWIHTNDHSSAVWLILTKGRIGETYLIGADGEEDNKTVMELILEMM-----GQP------KDAYDHVNDRAGHDLRYAIDSTKLREELGWKPEFTNFRDGLADTIKWYEEHEDWWKKEKEAVEAAYAKNGQ
1BXK Chain:A ((129-344))----------------FHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITF---------RYAIDASKIARELGCVPQET-FESGMRKTVQWYLANESWWKQVQDG----------


General information:
TITO was launched using:
RESULT:

Template: 1BXK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 919 20324 22.11 104.76
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : 22.11
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.453

(partial model without unconserved sides chains):
PDB file : Tito_1BXK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1BXK-query.scw
PDB file : Tito_Scwrl_1BXK.pdb: