Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENLKKMAGIKAAEFVSDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTTKQAEGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDESKLVEKLGAFKLPVEVVQYGAEQVFRHFERAGYKPSFREKDGQRFVTDMQNFIIDLALDVIENPIAFGQELDHVVGVVEHGLFNQM-VDKVIVAGRDGVQISTSKKGK
1O8B Chain:A ((23-218))--------------------IVGVGTGST------------------EGAVSSSDA------------FDLNEVDSLGIYVDGADEINGHMQMIKGGG-ALTREKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYRQ----GVVTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIV-----


General information:
TITO was launched using:
RESULT:

Template: 1O8B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 934 -77950 -83.46 -466.77
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -83.46
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.398

(partial model without unconserved sides chains):
PDB file : Tito_1O8B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1O8B-query.scw
PDB file : Tito_Scwrl_1O8B.pdb: