Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKTIHTDKAPKAIGPYVQGKIVGNLLFASGQVPLSPETGEIVGENIQEQTEQVLKNIGAILAEAGTDFDHVVKTTCFLSDMNDFVPFNEVYQTAFKEEFPARSAVEVARLPRDVKVEIEVIAEIG
1QAH Chain:A ((5-129))-RKVISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKNLGEILKAAGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQGNLPARAAYQVAALPKGSRIEIEAIAVQG


General information:
TITO was launched using:
RESULT:

Template: 1QAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 628 -55593 -88.52 -444.74
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.86

3D Compatibility (PKB) : -88.52
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.547

(partial model without unconserved sides chains):
PDB file : Tito_1QAH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1QAH-query.scw
PDB file : Tito_Scwrl_1QAH.pdb: