Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQLTLVRHGEAAPPVN----GNDIKRPLTARGHAQAEQTATFLKDIVKPNIFVVSPLLRAQETLAHIQTYFK---DVPVLLCDKI-------------------------------KPDDDAKE-----AIEWLSQI----------------------------------PYESIVVVCHMNVVGHIAELLTHET------F-------NPFALAEARIYDQAVIA------NGLSTQKNSFIPTI
3E9D Chain:A ((4-245))FALTIVRHGETQYNRDKLLQGQGIDTPLSDTGHQQAAAAGRYLKDLH-FTNVFVSNLQRAIQTAEIILGNNLHSSATEMILDPLLRERGFGVAEGRPKEHLKNMANAAGQSCRDYTPPGGETLEQVKTRFKMFLKSLFQRMFEEHGSALSSVPSEADQPVIAGLADDGAQNVPVHALMVSHGAFIRISVRHLVEDLQCCLPAGLKMNQVFSPCPNTGISRFIFTIHREESVLRATRIQGVFIN----


General information:
TITO was launched using:
RESULT:

Template: 3E9D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 562 -6161 -10.96 -42.20
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -10.96
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.462

(partial model without unconserved sides chains):
PDB file : Tito_3E9D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3E9D-query.scw
PDB file : Tito_Scwrl_3E9D.pdb: