Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKLVVFSGAGMSAESGISTFRDSNGLWENYDIQQVATPEAWERNPALVQRFYNERRKNILEAQPNEAHQYIAKLQD-HYDVQVITQNIDDPHERAGSQNVLHLHGNIRLAKSSGPDAQYTTQFYEVNGWK---LDLEQDFCP-NGYPLRPHVVWFGEAVPAYE--EAIRLVQSADIFIVIGSTLSVYPVAALVHEIPH-YSKAYYIAPQADHSRVPPQYKLLNMTATEGMHELFNQLTS
1YC5 Chain:A ((13-244))SRLTVTLTGAGISTPSGIPDF------------QNVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKK-----YTVEDVIKKLESSDVPLCDDCNSLIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDD-IATLKYNMDVVEFARRVMEEGG-


General information:
TITO was launched using:
RESULT:

Template: 1YC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1170 -40176 -34.34 -188.62
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -34.34
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.439

(partial model without unconserved sides chains):
PDB file : Tito_1YC5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YC5-query.scw
PDB file : Tito_Scwrl_1YC5.pdb: