Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISSAKKREVATRPDALPRTSVTEIFVELCLLFKIGEGGNKMAKQKIRIRLKAYEHRILDQSADKIVETAKRTGASVSGPIPLPTERSLYTIIRATHKYKDSREQFEMRTHKRLIDIVNPTPKTVDALMKLDLPSGVNIEIKL
3R2D Chain:J ((5-82))--------------------------------------------EKIRIKLRAYDHRLLDQSVKQIIETVKRTGGVVKGPIPLPTRKSEFS---------------------RILDIIRFTPQTIEALMEISLPAGVDVEVKM


General information:
TITO was launched using:
RESULT:

Template: 3R2D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain J - contact count / total energy / energy per contact / energy per residue : 310 -39919 -128.77 -511.78
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain J : 0.77

3D Compatibility (PKB) : -128.77
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.674

(partial model without unconserved sides chains):
PDB file : Tito_3R2D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3R2D-query.scw
PDB file : Tito_Scwrl_3R2D.pdb: