Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMRKPMIDSKAVVQAHNLFMTFKAENKKSADISAIVDLNMQIKKGELTALVGPDGAGKTTLLRLIAGLYKASSGSLHVLGLDIE-KHPQVVQDRISYMPQRFGLYEDLSVQENLNLYADLHGVPK--NVR-NQRFKRLLEIT--DLTQFTQRLAGQLSGGMKQKLGLACTLVRSPELLLLDEPSVGVDPLSRRDLWIIIEQLVQEENLSVIISTAYMDEAEKCAYVYIMHEGKILRQGSPEQLKALVHEQTWQIKPSEQIKPRIVQAQLLG-NSGEIIDAVPRGEQVNFISRQKELST---------NILP-------------------------------------------L-----GLVA-NRRPP--------------------------------------------------------ELED----A--FMMLLQ-Q------------------------------------------------------------NQ----K--------------------------QQ----------I-S-------------I------------------S-------QQT---------------FR---------S------------------EQN------NNSQSDQAVIVVKDLVRTFGD---FTAVANTSFTVQRGEIFGLLGPNGAGKTTTFRMLCGLLPASSGYLEVAGKNLRT-ARAEARAKVGYVSQKFALYSNLTVLENLKFFGGAYGLSGKKLDQQIDKALQQYDLKP-----------Q--IKSGDLPVGYKQRLSMAAALLHEPEILFLDEPTSGIDPLARHSFWYSIGKLANQGITIIITTHFMEEAEYCDRIAIQDAGKLLALGSPQQVRELASKDKHIVDMNEAFIAIVEQARALRHAG
4F4C Chain:A ((412-1306))-------IKGDITVENVHFTYPSR----PDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFN-CTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAA--KGRTTIIIAHRLSTIRNADLIISCKNGQVVEVGDHRALMAQQGL-YYDLVTAQT--FTDAVDSAAEG--------------------------ERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSLSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLF-DCSIAENIIYGLDPSSVTMA----QVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAR-EGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSEK---------------------------


General information:
TITO was launched using:
RESULT:

Template: 4F4C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1985 -6248 -3.15 -12.18
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -3.15
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.463

(partial model without unconserved sides chains):
PDB file : Tito_4F4C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F4C-query.scw
PDB file : Tito_Scwrl_4F4C.pdb: