Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MKIDILTLFPEMF-SPLEHSIVGKAREKGLLDIQYHNFRENAE-KARHVDDEPYGGGQGMLLRVQPIFDSFDAIEKK---NPRVILLDPAGKQFDQAYAEDLAQEEELIFICGHYEGYDERIKTL-VTDEISLGDYVLTGGELAAMTMIDATVRLIPEVIGKESSHQDDSFSSGLLEYPQYTRPYDYRGMVVPDVLMSGHHEKIRQWRLYESLKKTYERRPDLLEHYQLTVEEEKMLAEIKENKE-----
1UAL Chain:A ((19-270))SHMWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLS---------FADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHNSLEHH


General information:
TITO was launched using:
RESULT:

Template: 1UAL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1006 19007 18.89 82.64
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.86

3D Compatibility (PKB) : 18.89
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.530

(partial model without unconserved sides chains):
PDB file : Tito_1UAL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UAL-query.scw
PDB file : Tito_Scwrl_1UAL.pdb: