Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEMMMKSIKHLAFPLLSAALVMTGCASRKPATTATTGTTNPSTVNTTGLSEDAALNAQNLAGASSKGVTEANKAALAKRIVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDERGTREYNMALGERRAKAVQNYLIT-SGVNPQQLEAVSYGKEAPVNPGHDESAWKENRRVEINYEAVPPLLK
5U1H Chain:C ((7-122))------------------------------------------------------------------------EVVRVQLDVKFDFDKSKVKENSYADIKNLADFMKQYPSTSTTVEGHTDSVGTDAYNQKLSERRANAVRDVLVNEYGVEGGRVNAVGYGESRPVADNATAEGRAINRRVEAEVEAEA----


General information:
TITO was launched using:
RESULT:

Template: 5U1H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 540 15839 29.33 137.73
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain C : 0.66

3D Compatibility (PKB) : 29.33
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.656

(partial model without unconserved sides chains):
PDB file : Tito_5U1H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5U1H-query.scw
PDB file : Tito_Scwrl_5U1H.pdb: