Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDAKYAEYLAELDKEKPVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL
5EWT Chain:A ((1-247))MKIVSWNVNGIRAALK---------KNLIDFIENNMFEVIMFQETKGDIVPL-----DF---IMMGYEVISFPA---KRKGYSGVMTLTKIKP-INVIKGL-QI-KEFDDEGRTVTLELKDFYVINAAFPRAGDNLERLDFKLKFNNEIENFVLKLRRAKPVILCGDFNIAHQNIDGAFSDP--TIPGLTPQERSWFSHFLSLGFIDTFRYLHPN-VRKYSWWSYMGKA-REKNLGLRLDYCIVSEELKDRIKMADILIDIQGSDHAPIILELT-


General information:
TITO was launched using:
RESULT:

Template: 5EWT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1394 -122360 -87.78 -495.38
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -87.78
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_5EWT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EWT-query.scw
PDB file : Tito_Scwrl_5EWT.pdb: