Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQLSTIIEQAFEDCANFTAADCPSEIRQAVEEAIAGLDNGTLRVAEKINGEWVVHQWLKKAVLLSFKLNDNKPIESCDLRFYDKVETKFSGWTEEQFKAAGVRVVPPAVARRGSFQAKNVVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFIGARSEIVEGVIVEEGSVISMGVYIGQSTRIYDRETGEIHYGRVPAGSVVVPGNLPSAD-GKYSLYAAIIVKKVDAQTRAKTSLNDLLRAD
3GOS Chain:B ((3-274))MQQLQNVIETAFERRADITPANVDTVTREAITHVIDLLDTGALRVAEKIDGQWVTHQWLKKAVLLSFRINDNQVMEGAETRYYDKVPMKFAGYDEARFQREGFRVVPPATVRKGAFIARNTVLMPSYVNIGAFVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFVGARSEVVEGVIVEEGSVISMGVFIGQSTRIYDRETGEVHYGRVPAGSVVVSG-NLPSKDGSYSLYCAVIVKKVDAKTRSKVGINELLRT-


General information:
TITO was launched using:
RESULT:

Template: 3GOS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1458 -188468 -129.26 -695.45
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain B : 0.94

3D Compatibility (PKB) : -129.26
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.94
QMean score : 0.631

(partial model without unconserved sides chains):
PDB file : Tito_3GOS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GOS-query.scw
PDB file : Tito_Scwrl_3GOS.pdb: