Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNVEKLGGKTMTAKISVIMGSTSDWETMKEACQILDEFGVSYEKKVVSAHRTPDLMFEYAQNARKKGIKIIIAGAGGAAHLPGMVASKTTLPVIGVPVQSRTLNGLDSLLSIVQMPGGVPVATTAIGKAGAINAGLLAIQMLSMYDLELEAKLAERRSMLAKTVIESSDQLG
3LP6 Chain:C ((4-165))--------AGERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIG--GAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQ


General information:
TITO was launched using:
RESULT:

Template: 3LP6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 808 -127944 -158.35 -789.77
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain C : 0.85

3D Compatibility (PKB) : -158.35
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.629

(partial model without unconserved sides chains):
PDB file : Tito_3LP6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LP6-query.scw
PDB file : Tito_Scwrl_3LP6.pdb: