Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENLKKMAGIKAAEFVSDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTTKQAEGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDESKLVEKLGA-FKLPVEVVQYGAEQVFRHFERAGYKPSFREKDGQRFVTDMQNFIIDLALDVIENPIAFGQELDHVVGVVEHGLFNQ-MVDKVIVAGRDGVQISTSKKGK
1M0S Chain:B ((4-218))-LEMKKLAAQAALQYVKADRIVGVGSGSTVNCFIEALGTIKD---KIQGAVAASKESEELLRKQGIEVFNANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVDSSKQVDVLGSTFPLPVEVIPMARSQVGRKLAALGGSPEYRE----GVVTDNGNVILDVHNFSILNPVEIEKELNNVAGVVTNGIFALRGADVVIVGTPEGAKVI------


General information:
TITO was launched using:
RESULT:

Template: 1M0S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1287 -75342 -58.54 -353.72
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -58.54
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.417

(partial model without unconserved sides chains):
PDB file : Tito_1M0S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1M0S-query.scw
PDB file : Tito_Scwrl_1M0S.pdb: