Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVTTYIGLGSNLGDSRQILSEAITKLKSLG---EVKVSKLYQSPPMGPQDQPNYLNAVAQLKTELLPLELLDQLQRFEQEAGRVRLRHWGERTLDLDLLIYGNEKIQNERLTVPHVGILQRDFVVIPLLDLDADLHINDQPLKNLELIQQPTLTVLADESWA
1CBK Chain:B ((1-158))-MITAYIALGSNLNTPVEQLHAALKAISQLSNTHLVTTSSFYKSKPLGPQDQPDYVNAVAKIETELSPLKLLDELQRIENEQGRVRLRRWGERTLDLDILLYGNEIIQNERLTIPHYDMHNREFVIVPLFEIASDLVLPNSQIITELVKQFAD---HKMIKL-


General information:
TITO was launched using:
RESULT:

Template: 1CBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 771 -19665 -25.51 -126.87
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.81

3D Compatibility (PKB) : -25.51
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.466

(partial model without unconserved sides chains):
PDB file : Tito_1CBK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1CBK-query.scw
PDB file : Tito_Scwrl_1CBK.pdb: