Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDETKMSYQSIFRPDAFANKVIIVTGGGSGIGRCTAHELAALAAQVVITGRKIEKLEKVSQEIIEDGGLVHFIVCDNREEEQVKNMIAEVIEKFGKLDGLVNNAGGQFPSALEN-ISANGFDAVVRNNLHATFYLMR-EAYNQWMAKHGGSIVNMTADMWG--GMPGMGHSGAARSGVDNLTKTASVEWGKSGVRVNAVAPGWIVSSGMDNYSGDFAKVIIPSLAGNVPLKRMGTESEVSSAICYLLSDAAAFVSGVTLRIDGAASQGTRMYPLAEATNSQSYNGFHRAFIPEIFKKDKTEKVEQSNNSGSE
5H5X Chain:C ((17-259))----------------FAGRTALVTGAASGIGLATARRLGAGGARVVVADFNAEGAEKAAAELRAGGVEAAAVELDVTRPESVEAAVGFAVDTFGSLDLAVNNAGIGGPSAPTGEYDVAAYQRVVRTNLDGVFYSMRYELPAIEAAGKGGSIVNV-ASILGSVGFAGSPAYVAAKHGVVGLTKAAAAEYAARGIRINAVGPGFIDTPLLKTME----EAAYKGLVALHPAGRLGRSDEVAELIVFLLSDRASFVAGSYHLVDGA------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5H5X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1356 -110689 -81.63 -463.13
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain C : 0.73

3D Compatibility (PKB) : -81.63
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.466

(partial model without unconserved sides chains):
PDB file : Tito_5H5X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5H5X-query.scw
PDB file : Tito_Scwrl_5H5X.pdb: