Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISKKSKDKEELKMTAIYNSVTELIGKTPIVKLNKIVPEDSADVFVKLEFFNPGGSVKDRIALSMIEKAEHDGLLKPGDTI-IEPTSGNTGIGLSMVGVAKGYKVIIVMPETMSIERRLLMKGYGAELILTPGADGISGSIREAER-LAKE-NGYFLPLQFENEANPLVHEKTTGPEIHQAFGVNGLDAFVAGIGTGGTITGAGRELKRVYPKSRINRGRTSRICYFRRERSGTSQNPRNRYRFCS
2ISQ Chain:A ((3-176))----------------IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQ-QFENPANPKIHYETTGPEIWKGTG-GKIDGFVS------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2ISQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 780 -1111 -1.42 -6.50
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -1.42
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.424

(partial model without unconserved sides chains):
PDB file : Tito_2ISQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ISQ-query.scw
PDB file : Tito_Scwrl_2ISQ.pdb: