Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDRRTDMRAVVQRVSKAAVSVDQQEIGKIGYGLLVLLGIHETDTQKDVDYLVKKIAQMRIFEDEQ-GKMNISVEDVGGQILSISQFTLFADTKKGNRPSFVEAARPETAIPLYESFNEGIRSR--GITVATGQFGADMSVSLVNDGPVTIIIDSKNK
2OKV Chain:B ((1-149))------MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESGKHWSKSVMDKQYEILCVSQFTLQCV-LKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRPELIKDGKFGAYMQVHIQNDGPVTIELESPA-


General information:
TITO was launched using:
RESULT:

Template: 2OKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 687 -43711 -63.63 -299.39
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : -63.63
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.519

(partial model without unconserved sides chains):
PDB file : Tito_2OKV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OKV-query.scw
PDB file : Tito_Scwrl_2OKV.pdb: