Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMILTITMNPSIDSIYFTKHFE-LGTMTRFDSPVRYVGGKGINCGRASALLGSSVILTGFLGGY-FGSMIQDMLKNENLFDLHFLPIA-EESRGAVTIMHDDET-Q-TELVEAGPEIADTTIKKLMNDI-KLISKNNYLSVITINGSVNNP-DPFLYAKLLQYIKEQIDPSTYILMDISGQHLRE-VLASKYKPMFIKPNIHEFSDIIHQKITQKSDIKHHLKTNPLFKDIDVIMISCGSYGAVVKVKEEFWNVEIPKIPIINTTGSGDATVGGFAHSLEQNYPLKECVRYAMACGMSNAQQSEVGKVIPADVKNLAKSIKITEMK
3Q1Y Chain:A ((3-309))LIYTITLNPAIDRLLFIRGELEKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSDNLD-KLYAILKEKH-INHDFLVEAGTSTRECFVVLSDD-TNGSTMIPEAGFTVSQTNKDNLLKQIAKKVKK---EDMVVIAGSPPPHYTLSDFKELLRTVK---ATGAFLGCDNSGEYLNLAVE---MGVDFIKPNEDEVIAILDEKTN---SLEENIRTLAE--KIPYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMPITETLKVATGCSASAVMQQDSSSFDLEAAGKLKNQVSIIQL-


General information:
TITO was launched using:
RESULT:

Template: 3Q1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1707 1372 0.80 4.59
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : 0.80
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.461

(partial model without unconserved sides chains):
PDB file : Tito_3Q1Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3Q1Y-query.scw
PDB file : Tito_Scwrl_3Q1Y.pdb: