Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENLKKMAGIKAAEFVSDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTTKQAEGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDESKLVEKLGAFKLPVEVVQYGAEQVFRHFERAGYKPSFREKDGQRFVTDMQNFIIDLALDVIENPIAFGQELDHVVGVVEHGLFNQ-MVDKVIVAGRDGVQISTSKKGK
4M8L Chain:A ((10-221))-DELKKLAATEAAKSITTEITLGVGTGSTVGFLIEELVNYRD---KIKTVVSSSEDSTRKLKALGFDVVDLNYAGEIDLYIDGADECNNHKELIKGGGAALTREKICVAAAKKFICIIDESKKVNTLGNFPLPIEVIPMARSYIARQIVKLGGQPVYRE----QTITDNGNVILDVYNLKIDNPLKLETELNQITGVVTNGIFALKPADTVIMATKDSNI--------


General information:
TITO was launched using:
RESULT:

Template: 4M8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1237 -94082 -76.06 -445.89
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -76.06
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.404

(partial model without unconserved sides chains):
PDB file : Tito_4M8L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M8L-query.scw
PDB file : Tito_Scwrl_4M8L.pdb: