Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKASPHRPTKALIHLGAIRQNIQQMGAHIPQGTLKLAVVKANAYGHGAVAVAKAI-QDDVDGFCVSNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEV-DLTGLTVHLKIDSGMGRIGFREASE-VEQAQDLLQQ-HGVCVEGIFTHFATADEESDDYFNAQLERFKTILASMK--EV-PELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLDLPYDLIPALTLESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFSVLVDGQACPIVGRVSMDQITIRLPK--LYPLGTKVTLIGSNGDKEITATQVATYRVTINYEVVCLLSDRIPREYY
4LUY Chain:B ((3-371))---KITVPTWAEINLDNLRFNLNNIKNLLEEDIKICGVIKADAYGHGAVEVAKLLEKEKVDYLAVARTAEGIELRQNGITLPILNLGYTPDEAFEDSIKNKITMTVYSLETAQKINEIAKSLGEKACVHV-IDSGMTRIGFQP-NEESVQEIIELNKLEYIDLEGMFTHFATADEVSKEYTYKQANNYKFMSDKLDEAGVKIAIKHVSNSAAIMDCPDLRLNMVRAGIILYGHYPSDDVFKDRLELRPAMKLKSKIGHIKQVEPGVGISYGLTYTTTGKETIATVPIGYADGFTRIQKNPKVLIKGEVFDVVGRICMDQIMVRIDKDIDIKVGDEVILFGEG---EVTAERIAKDLGTINYEVLCMISRRVDRVYM


General information:
TITO was launched using:
RESULT:

Template: 4LUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2007 -59631 -29.71 -166.10
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -29.71
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.585

(partial model without unconserved sides chains):
PDB file : Tito_4LUY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LUY-query.scw
PDB file : Tito_Scwrl_4LUY.pdb: