Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKFNELNLSADLLAEIEKAGFVEASPIQEQTIP--LALEGKDVIGQAQTGTGKTAAFGLPTLEKIRT----EEATIQALVIAPTRELAVQSQEEL-----FRFGRSKGVKVRSVYGGSSIEKQIKAL-KSGAHIVVGTPGRLLDLIKRKALKL-QDIETLILDEADEMLNMGFLEDIEAII-------SRVPENRQTLLFSATMPDAIKRIGVQFMKAPEHVKIAAKELT----TELVDQYYIRVKEQEKF-DTMTRLMDVAQPEL--------AIVFGRTKRRVDELTRGLKIRGFRAE----GIHGDLDQNKRLRVLRDFKNGNLDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVAPNEMGYLQIIENLTKKRMKGLKPASVEESFQSKKQVALKKIERDFADETIRANFEKFGKDARKLAAEFTPEELAMYILSLTVQDPDSLPEVEIAREKPLPFKPSGNGFGGKAKGGRGGRRGDDRRERDRRGNGRRDEFKKGSRGNDRFDKEKRYRKDNKKPRNTLSEKQTGFVIRNKGDK
4TYW Chain:A ((27-407))-------LDKEIHKAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQYMVKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACV-SLVGGTDFRAAMNKMNKLRPNIVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLLEIGFRDDLETISGILNEKNSKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQ---SVVISEKFANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILK-NEFKKDLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGKEGSSVLFICKDELPFVRELED------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4TYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1759 91718 52.14 266.62
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : 52.14
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.477

(partial model without unconserved sides chains):
PDB file : Tito_4TYW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TYW-query.scw
PDB file : Tito_Scwrl_4TYW.pdb: