Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIILAIIQDKDSNRLSNELIDANIR-ATKLSSTGG--FL--------------KAGNSTFIVGIEDDRVEEALEIIKKTCESRKQFVSTPVTLDISMDGGVPYPVEVEVGGATVFVLPVEGFHQF
3NCQ Chain:B ((1-101))MKKIEAIVRAEKFPEVKAALEERGFYGMTVTDVKGRGQQGGMQIQFRGRTMEVTLLPKVKLEIVVKDDAVEEVIGLIVNSAFTG------------------------SPGDGKIFIIPVEDVVR-


General information:
TITO was launched using:
RESULT:

Template: 3NCQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 266 -11190 -42.07 -133.21
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : -42.07
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.681

(partial model without unconserved sides chains):
PDB file : Tito_3NCQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NCQ-query.scw
PDB file : Tito_Scwrl_3NCQ.pdb: