Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKERFQMKKYQWGIVGLGTIAHEFAESFNQE---TSELTAVASRTSEKAENFAHRYNIPKAYGSYQEMLDDAEIDIVYIAVPNRQHIDHILAALEAGKHVLCEKAITMNKKELADAMRLAEEKNLILAEAMTIFNMPLYQQLRSIMDTGKLGALKMIQAPFGSYKEPDPKNRFFNPELAGGALLDIGTYAVSFARFFLSS-QPEVV-ASTMVPFETGVDEQSVTILRNKENELAAVSLTFQAKMPKVGIVAFENGYVTIADYP-RADRAEILFTDGTKEF--I---ESGNTSEAMNYEIKNMVHMIEGDLP--N-RSLFLTKDVIEILDQMQVLWKNM
3OHS Chain:X ((2-327))--------ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQGTLGDLRVARAEFGKNL--THVPRAVDWAQAGGALLDLGIYCVQFISMVFGGQKPEKISVMGRRH-ETGVDDTVTVLLQYPGEVHGSFTCSITAQLSNTASVSGTKGMAQLLNPCWCPTELVVKGEHKEFLLPPVPKNCNFDNGAGMSYEAKHVRECLRKGLKESPVIPLVESELLADILEEVRRAIGV-


General information:
TITO was launched using:
RESULT:

Template: 3OHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 1811 -13690 -7.56 -43.88
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain X : 0.75

3D Compatibility (PKB) : -7.56
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.527

(partial model without unconserved sides chains):
PDB file : Tito_3OHS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OHS-query.scw
PDB file : Tito_Scwrl_3OHS.pdb: