Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIILAIIQDKDSNRLSNELIDANIR-ATKLSSTGG--FL--------------KAGNSTFIVGIEDDRVEEALEIIKKTCESRKQFVSTPVTLDISMDGGVPYPVEVEVGGATVFVLPVEGFHQF
3NCR Chain:C ((1-101))MKKIEAIVRAEKFPEVKAALEERGFYGMTVTDVKGRGQQGGMQIQFRGRTMEVTLLPKVKLEIVVKDDAVEEVIGLIVNSAFTG------------------------SPGDGKIFIIPVEDVVR-


General information:
TITO was launched using:
RESULT:

Template: 3NCR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 252 -10819 -42.93 -128.79
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain C : 0.62

3D Compatibility (PKB) : -42.93
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.689

(partial model without unconserved sides chains):
PDB file : Tito_3NCR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NCR-query.scw
PDB file : Tito_Scwrl_3NCR.pdb: