Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPFHSTPNKGGTFDMTVKVGINGFGRIGRLAFRRIKEVSDDIEVVAINDLTSPTMLAQLLQFDSTHGTYPGTVTATEDSIVVDGEATRVYAEPDASKIPWAKENGVDIVLECTGFYTSEEKAKAHLDAGVKRVVISAPAGAMK-TIVYNVNDDTLDEND-KIISAGSCTTNCLAPMAYFLNNEFGIEVGTMTTVHAYTSTQMLLDGPVKGGNLRAARSAADNTIPHSTGAAKAIGLVIPELQGKLQGHAQRVPVVDGSLTEL-VSVLKTKVTADQVNEAIKKHTVDNPSFG---------YDDRQIVSSDVIGTTQGSIFDPTQTEVTTAGDFQLVKTVAWYDNEYGFTCQMIRLLEKFANL
2EP7 Chain:A ((3-334))----------------IKVGINGFGRIGR-SFFRASWGREEIEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIKVFAQKDPSQIPWG-DLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLAPCVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLPHK--DFRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPVPDGSLIDLTVVVNKAPSSVEEVNEKFREAAQKYRESGKVYLKEILQYCEDPIVSTDIVGNPHSAIFDAPLTQVID----NLVHIAAWYDNEWGYSCRLRDLV------


General information:
TITO was launched using:
RESULT:

Template: 2EP7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1776 -76325 -42.98 -238.52
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -42.98
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_2EP7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2EP7-query.scw
PDB file : Tito_Scwrl_2EP7.pdb: