Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKFSDEYWMQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESLK------NYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGY--YNHKFTFEHGCLHEKCAQQLSLFFKQRREQKKQEKQQKNVLK
3DH1 Chain:A ((23-177))--MEETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEVFEH-TVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ----------------


General information:
TITO was launched using:
RESULT:

Template: 3DH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 795 -59766 -75.18 -406.57
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -75.18
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_3DH1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DH1-query.scw
PDB file : Tito_Scwrl_3DH1.pdb: