Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATAVNCNICFIGGGNMAQALIGGLISRGLPPTRITVSDPVEQIR-QLLQE-KEV-HVTQDNTAAIQNADVVVLAVKPQVLANVLRPLKGLL-SD-KLVISIIAGAEIKTISNLID-SERIVRVMPNTPALVQTGAHGIYATDVVGASDRELTSQILAATGLTIWVNSEAQIDAVTAVSGSGPAYFFYLMESMIRAGKNLGLDEKVATALTLQTALGAAQMAITSSNTPSELRKNVTSPNGTTQAALEVFDRAQISQNIQSALAVAQKRSQELAQELSDSAK
3TRI Chain:A ((2-273))----NTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRS-LDKLDFFKEKCGVHTT-QDNRQGALNADVVVLAVKPHQIKMVCEELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVRAMPNTPSSVRAGATGLFANETVDKDQKNLAESIMRAVGLVIWVSSEDQIEKIAALSGSGPAYIFLIMEALQEAAEQLGLTKETAELLTEQTVLGAARMALETEQSVVQLRQFVTSPGGTTEQAIKVLESGNLRELFIKALTAAVNRAKELSKTVD----


General information:
TITO was launched using:
RESULT:

Template: 3TRI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1188 -41100 -34.60 -154.51
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -34.60
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.530

(partial model without unconserved sides chains):
PDB file : Tito_3TRI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TRI-query.scw
PDB file : Tito_Scwrl_3TRI.pdb: