Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYDTIIIGAGPAGMTAALYAARSNLKVALIEGGLPGGQMNNTSDIENYPGYANISGPELAEKMFEPLENLGVEHIYGYVENVEDHGD-FKKVMTDDQTYETRTVIVATGSKHRPLGVPGEEELNSRGVSYCAVCDGAFFRDQDLLVVGGGDSAVEEALFLTRFAKTVTIVHRRDQLRAQKVLQDRAFANEKISFIWDSVVKEIKGENRVESVVFENVKTGQVTEQAFGGVFIYVGLDPLSDFVKE-LNIQDQAGWIVTDSHMKTAVDGIFAVGDVRLKD--LRQVTTAVGDGAIAGQEAYKFITEHS
3F8D Chain:B ((15-319))KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET-PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENR-DEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK-


General information:
TITO was launched using:
RESULT:

Template: 3F8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1821 -83977 -46.12 -279.92
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : -46.12
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.567

(partial model without unconserved sides chains):
PDB file : Tito_3F8D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3F8D-query.scw
PDB file : Tito_Scwrl_3F8D.pdb: