Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLINTEVKPFQATAYHNGQFIEVNETNLKGKWSVVFFYPADFTFVCPTELEDLADNYAEFQKLGVEIYGVSTDTHFTHKAWHDTSDAIKKIQYPLIGDPTWTLSKNFDVLIESEGLADRGTFVIDPEGKIQIVEINAGGIGRDASELLRKVKAAQYVHSHPGEVCPAKWKEGEATLAPSIDLVGKI
4MAB Chain:E ((1-186))-SLINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGE----KWKEGEATLAPSLDLVGKI


General information:
TITO was launched using:
RESULT:

Template: 4MAB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 831 -79622 -95.81 -437.48
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain E : 0.93

3D Compatibility (PKB) : -95.81
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.633

(partial model without unconserved sides chains):
PDB file : Tito_4MAB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MAB-query.scw
PDB file : Tito_Scwrl_4MAB.pdb: