Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKCGENNEGGKYMQIDWNNLGFSYIKTPWRFIAKWKDGQWEEGELTEDNYLTIHEGSPALHYGQQCFEGLKAYRRKDGKVNLFRPEQNSRRMNQSARRLLMPMVPE-KMFVDAVKQVVKANEDFVPPYGTGATLYLRPLLIGVGENIGVHPAPEYL--FVVFCTPVGAYFKGGL--KPTNFIVSDYDRAAPKGT-GAAKVGGNYAASLLPGTEAKELDYSDCVYLDPATHTKIEEVGAANFFGITKDGKFITPQ-SPSILPSITKYSLLQLAEERLGLQAIEGDIFIDDLDQFAEAGACGTAAVISPIGGIYHNNNLHVFYSETEVGPVTKRLYDELTGIQFGDIEAPEGWIEVVE
1I1L Chain:B ((5-307))-----------------------------------KADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGPV-VFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKN--------NLTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALD--VNGYISEGAGENLFEV-KDGVLFTPPFTSSALPGITRDAIIKLAKE-LGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSV---DGIQV--GEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQV-


General information:
TITO was launched using:
RESULT:

Template: 1I1L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1594 -30653 -19.23 -103.56
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : -19.23
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.399

(partial model without unconserved sides chains):
PDB file : Tito_1I1L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1I1L-query.scw
PDB file : Tito_Scwrl_1I1L.pdb: