Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLINPIELLKEKVSSTILNNQDGYLGEKTNALSKFYPILLSLLAAKPDLIGQLKNSLAHSLSDLFSHNEQIKNTVLTHLSGTAPNNEIENTLNSALKPSLNAISDVAGNDQQSIVNYLRQHAETIRSYLPGWAVGLLAPLGIGAGLSSVTSSTAPPLAAATETTGKSRGFLPIIALIILGLLIAWLWRSCQHKEATPAPETKAASGVEAAAAPATLTLSTDDKGAVSQCQAGIGDQGFLATLQTQVKQVFSATKDCDVDTSQTYAAAFTDKDALAGVLGALKGIPNASLEWVGDKITLKAGDAAALEALTAKVKALVPHTEVVATAPETAEQSVSNSLSASQTALTAIDPNNVDENALVKALNLQIINFASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDSTGNAAANKALSQRRAQAVVDYLVSKGVDASKLVAKGHGSEQPVADNTTEEGRFKNRRIEFSVAQ
4B5C Chain:B ((30-137))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKRSVYFDFDSYSVQDQYQALLQQHAQYLKSHPQRHILIQGNTDERGTSEYNLALGQKRAEAVRRALSLLGVGDAQMEAVSLGKEKPVALGHDEASWAQNRRADLVYQ-


General information:
TITO was launched using:
RESULT:

Template: 4B5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 492 -22827 -46.40 -211.36
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain B : 0.55

3D Compatibility (PKB) : -46.40
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.565

(partial model without unconserved sides chains):
PDB file : Tito_4B5C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4B5C-query.scw
PDB file : Tito_Scwrl_4B5C.pdb: