Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITLKSAREIEAMDKAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENFLPLQIGVDGAMMDYPYATCCSLNDEVAHAFPRHYILKDGDLLKVDMVLGGPIAKSDLNVSKLNFNNVEQMKKYTQSYSGGLADSCWAYAVGTPSEEVKNLMDVTKEAMYKGIEQAVVGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGIAGRGLRLREGMVLTIEPMINTGDWEIDTDMKTGWAHKTIDGGLSCQYEHQFVITKDGPVILTSQGEEGTY
4FUK Chain:B ((60-310))HDDSKKTAEIQRIKTVCQLSREVLDIATAAAKPGITTDELDRIVHEATVERNMYPSPLN----YYGFPKSVCTSVNEVICHGIPDSRELEEGDILNIDVSS---------------------------YLNGFHGDLNETVFIGRPDDDSVRLVHAAYECLCAGIGVVKPEALYKQVGDAIEACASQYQCSVVRTYTGHGVGHLFHTSPTVCHYANNKSLGMMRPGHVFTIEPMINLGTW-QDVTWPDKWTSTTKDGRRSAQFEHTMVVTNGGVEIFTDWVDG---


General information:
TITO was launched using:
RESULT:

Template: 4FUK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1500 -132226 -88.15 -526.79
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain B : 0.71

3D Compatibility (PKB) : -88.15
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.502

(partial model without unconserved sides chains):
PDB file : Tito_4FUK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FUK-query.scw
PDB file : Tito_Scwrl_4FUK.pdb: