Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPKKILVLHTGGTISMQADA-S--GAVVTS-SDNPMNH-VSNPLE-GIQVHALDFFNLPSPHIKPKHMLVLYQKIKEEADNYDGVVITHGTDTLEETAYFLDTMEVPHMPIVLTGAMRSSNELGSDGVYNYLSALRVASDDRAADKGVLVVMNDEIHAAKYVTKTHTTNVSTFQTPTHGPLGLIMKQEILYFKTAEPRV----RFD--LDHIQGLVPIISAYAGMTDELIDMLDLEHLDGLIIQAFGAGNIPKETAQKLESLLQKGIPVALVSRCFNGIAEPVYAYQGGGVQLQKAGVFFVKELNAQKARLKLLIALNAGLTGQALKDYMEG
1HO3 Chain:B ((1-324))-LPNITILATGGTIAGGGDSATKSNFTVGKVGVENLVNAVP-QLKDIANVKGEQVVNIGSQDMNDNVWLTLAKKINTDCDKTDGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAADKASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARKHTSDTPFDVSKLNELPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKSVFDTLATAAKTGTAVVRSSRVPTGATTQDAE-----VDDAKYGFVASGTLNPQKARVLLQLALTQTKDPQQIQQIFN-


General information:
TITO was launched using:
RESULT:

Template: 1HO3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1874 66321 35.39 212.57
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : 35.39
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.477

(partial model without unconserved sides chains):
PDB file : Tito_1HO3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HO3-query.scw
PDB file : Tito_Scwrl_1HO3.pdb: