Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKLVVFSGAGMSAESGISTFRDSNGLWENYDIQQVATPEAWERNPALVQRFYNERRKNILEAQPNEAHQYIAKLQD-----HYDVQVITQNIDDPHERAGSQNVLHLHGNIRLAKSSGPDAQYTTQFYEVN---G------------WKLDLEQDFCP---NGYPLRPHVVWFGEAVPAYE--EAIRLVQSADIFIVIGSTLSVYPVAALVHEIP-HYSKAYYIAPQADHSRVPPQYKLLNMTATEGMHELFNQLTS
5BWL Chain:A ((38-290))AKHIVIISGAGVSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTPATN-RFRFHFQGPCGTTLPEALA----


General information:
TITO was launched using:
RESULT:

Template: 5BWL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1159 -20737 -17.89 -91.35
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -17.89
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.476

(partial model without unconserved sides chains):
PDB file : Tito_5BWL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BWL-query.scw
PDB file : Tito_Scwrl_5BWL.pdb: