Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTSDFVKYLQRMIAITDTGLTFTKDPFDRERYEDLRSLLSEMLNQVSDLDADEVAELLKPTSAYATPLMDVRAWIVEDEKICLVRGQGENDWALPGGFGEVGYSPTENILKEIEEETGFKAKVERLLAVFDTNRFQL-Q-SKQYAKFVFECKLLDGQFQENQEIADLQFFAIDQLPNLSEKRITKEQIELLWQVYQGHRGQYLD
3Q1P Chain:B ((2-199))--TIKWIDWVKQIQSIAQAGLTYSKDVYDIERFQQLRDISISMMSHYTKTDWEVVEKLFASETGYQTPKVDIRAVVFQNEKLLFVKE---GKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHFKLLAIFDKEKHQPSPSATHVYKIFIGCEIIGGEKK----TEEVEFFGENELPNLSIARNTEDQIKEMFAYMKDPQ-----


General information:
TITO was launched using:
RESULT:

Template: 3Q1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 712 -27295 -38.34 -144.42
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : -38.34
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.444

(partial model without unconserved sides chains):
PDB file : Tito_3Q1P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3Q1P-query.scw
PDB file : Tito_Scwrl_3Q1P.pdb: