Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQVDIAALSPQVVWQHFQTLCTIPRPSKHEQ------QLREFLQNWAESRNLE-TYVD--------E------VGNLIIRKNATPGKKHVSGVILQGHLDMVTQANTGTVHDFFKDPIRPVLE--EGWLIAKDTTLGADNGIGVALALAVLDSND-----IHGPIEVLLTVDEEAGMSGARLLETGV----L-KGKWLFNIDTEEW----GELYLGCAGSIDVEVEQPLNYEPIPENLNIVNIQVAGLKGG--HSGVDIHLGRGNANVILARFLNQHLASLGGHLVEFTGGTA-RNALPRE-AVATIAISPNQLSSLEK--LLAE--Y--QAAW-KEQLKGIDDNLQLSIQSTGAKVTEVINQQQQNEWLQALATSPYGVASMSQVLPDVVETSNNIGVVRLNREGGKAILMVRSMVNQEAQDFAEKIQAHFSQF--------NIGSTLTPLVSGWTPNPDSAALKCLQQAYQNAFNIEPNLKVIHAGLECGII-AEHYPHLQM--VSFGPDIQGAHAPGERVKVDTVEKCWKLLVTALASVE
4G1P Chain:A ((13-475))-------DSLKPQFFSRLTKAIQIPAVSSDESLRSKVFDKAKFISEQLSQSGFHDIKMVDLGIQPPPSTPNLSLPPVILSRFGSD---PSKKTVLVYGHYDVQPAQLE---DGWDTEPFKLVIDEAKGIMKGRGV---TDDTGPLLSWINVVDAFKASGQEFPVNLVTCFEGMEESGSLKLDELIKKEANGYFKGVDAVCISDNYWLGTKKPVLTYGL------------------RGCNYYQTIIEGP-SADLHSGIF-GGVVAEPMIDLMQVLGSLVDS-KGKIL-IDGIDEMVAPLTEKEKALYKDIEFS-VEELNAATGSKTSLYDKKEDILMHRWR--YPSLSI--HG-----------------------VEGAF-----------SAQGAKTVIP---AKVFGKFSIRTVPDMDSEKLTSLVQKHCDAKFKSLNSPNKCRTELIHDGAYWVSDPFNAQFTAAKKATKLVYGVDPDFTREGGSIPITLTFQDAL-NTSVLLLPMGRGDDGAHSINEKLDISNFVGGMKTMAAYLQYY-


General information:
TITO was launched using:
RESULT:

Template: 4G1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1851 29441 15.91 73.05
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 15.91
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.398

(partial model without unconserved sides chains):
PDB file : Tito_4G1P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G1P-query.scw
PDB file : Tito_Scwrl_4G1P.pdb: