Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKALPIAVAVVLGGAALVPVYYATQHPTTEVGHKADKNASPIQKISYVLGYEVAQQTPPELDTKAFVQGIHDVRNKQPSAYTQEDLKAAVAAYEKELQQKMQHQDKPEQAGTATDSADAQFLAENKTKAGVKTTASGLQYIITKEGTGKQPTAQSIVKVHYEGRLINGQVFDSSYKRGQPVEFPLN--QVIPGWTEGLQLMKEGGKATFFIPSNLAYGPQEL-PGIPANSTLIFDVELISVK
2PBC Chain:C ((10-97))-----------------------------------------------------------------------------------------------------------------------------------------------------------DVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKIE


General information:
TITO was launched using:
RESULT:

Template: 2PBC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 356 -4444 -12.48 -52.28
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain C : 0.65

3D Compatibility (PKB) : -12.48
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.734

(partial model without unconserved sides chains):
PDB file : Tito_2PBC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PBC-query.scw
PDB file : Tito_Scwrl_2PBC.pdb: