Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNVEKLGGKTMTAKISVIMGSTSDWETMKEACQILDEFGVSYEKKVVSAHRTPDLMFEYAQNARKKGIKIIIAGAGGAAHLPGMVASKTTLPVIGVPVQSRTLNGLDSLLSIVQMPGGVPVATTAIGKAGAINAGLLAIQMLSMYDLELEAKLAERRSMLAKTVIESSDQLG
1D7A Chain:O ((1-161))-----------GARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRG


General information:
TITO was launched using:
RESULT:

Template: 1D7A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain O - contact count / total energy / energy per contact / energy per residue : 786 -121409 -154.46 -754.09
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain O : 0.85

3D Compatibility (PKB) : -154.46
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.636

(partial model without unconserved sides chains):
PDB file : Tito_1D7A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1D7A-query.scw
PDB file : Tito_Scwrl_1D7A.pdb: