Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIRNATIPAYIQSSPNHSNHNNMSLSLSLQKQKDANADGEDYADGRRILMHNPLKGHLFSSTSDSSLHSSIGQPEMIAAASSSVQKGSSGAGNRLDTALGFCGEETAQGLVAEQVEGPCDEKHVNLIEVRAIDSDDDPSSLEEQEHQVCCTIPSLPAVAFIMCFGAIIVGLLGFLPFYFVGVQSNAHTTEYLLSEAMKGVASITQNSLAMLPAFVHIVTFNYIKRHNTTLEETNLPQDPDQLLVSLLTVLTRFNEAISYLRFVYEGGLYTNAGYTDPKPTDANQTRKIYGGYSRTHNTVPMLEMYNESVTAVEPPNVLGYFDFHREVTLPEGAMNQIVKTWVADPQNNTRWLLASDNTTPTYFNFVMPFTVNGSLGYFAAGSSSDTIIEETTTLVSFLRKNGRIFLVDATRNIVVGNSWNQSVQSRTEDSAIGATIYTPTRIYEITEPIILAAMQVVNESGSLTEVLKDKDTALITFRYKGNNAFLNLTKVKDSYGLDLVLGVVVVRADFEKAFSTARTAAFTVTVLVVVIAAVVAVVIAWFVVREMKRLIPQLIRASNLEVSRGDGKDHRVQGWLAYITEIRGIHEAFVRVERSLREMRTFVPAAVMTLAPSDGSHSDADLADGKTRRVRTRFNANIVKDNTNEFSRVDVAMVLVDVHRAMDTTEACFIMDIISQRAEEYTGYIESVSSSSFFVNFGTQSQNPLVVSKICRFALEVYQSVPDFMRNRVVCFAVRMPFLVGTCGARHSKARVVFDTQRMLDISKVLWDIGCHVASTTDTLSHFATSSAQIPWYRIDCVRFPDEVSQVTLCELRDPRSSLQDNEDMPKKMGDGLSKMCKGEYKQALMIFDSAHSENVQLKRLRKICIDRIASGDTSKYIHLIQDVYALDATPSNHEDMAVGGGAAMYDYDAGSPAGVATSSGEVCDPSNEPPLLACSSFENGAGMPAPVLSQPAAHASPPVAPHTTPICHSKTSPTPSVTTGGEAAEPSHLTERAVTAAMGPREFPPCGASQVVGASGAGPGLPPFHPRTPGATTTAASVPGSSPPWGARDDNASEAPSFLTNAFVFDSSMASADAVGATVQAADEPQVLRDVNQHEWQVSLYPIGSGAFSFIYLGMS-DDGVQVAIKRIPRLHRGIKEEEMVSEVCTCAKLRHPNIVPYISCCVTQSYLAIIMEYMPGGSLHDIIDNFGKLPRTVVRRFMLDIVNGLAYLHESTT-HGDVKPHNILLGVDGVCKLSDFGSASDRLTEACCVNEDRLMRGTAVYISPEGARNLPLTSASDIYSLGISFLEMVLGRLPWKWADPESTDELPLRHDHEFVQCLTANAIVVDIPDDLDNDMRELALASCAE-NPEKRPTAQELLSFAFLI
3FXZ Chain:A ((28-273))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY-------LNENPLRALYLIA---TNGTPELQNPEKLSAIFRDF-LNRCLEMDVEKRGSAKELLQHQFL-


General information:
TITO was launched using:
RESULT:

Template: 3FXZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1139 -36595 -32.13 -150.59
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -32.13
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.391

(partial model without unconserved sides chains):
PDB file : Tito_3FXZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FXZ-query.scw
PDB file : Tito_Scwrl_3FXZ.pdb: