Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALVKTKLAAAPQPSRTPTPGSSPKEWTPPTHTHESPEHLSTDEPDVLVPAHKYVYDVKTCAWKGVDTMLRVLHPNRGLSQGTMRVCFALEELDETGFSSRMVAKMFRHNISKVVESD-YFNEGEAQCICGIFAEKFNRVQVPAGFQRHIVSFLQCETVRIKLSEVPEAYQHKRSGFFSYRTTDSADILFTMEPRLAGNFTKYTNNFGDVYDGFERRQSLEEEKKRHRVLMAVEAFSHFTLVESGGSMLVCDLQGVNDFLTDPQIHTEDGKGLGMGNMGQDGIRKWMEAHVCNEVCRAIMLEPLSKGLRNFTRTAENESRVSYYQILRAKLRSQTPVRPEDIIPLSKPLSLMSDDERLEYAMRLSALLSE
4ZME Chain:A ((97-272))------------------------------------------------------------------------------------------EAMTQLKNGTKFVLKLYKK---QQASRELYFEDVKMQMVCRDWGNKFNQKKPPKK-----IEFLMSWVVEL-IDRSP--------------SSNGQPILCSIEPLLVGEFKKNNSNYGAVLTNRSTPQ----------------AFSHFTYELSNKQMIVVDIQGVDDLYT-PQIHTPDGKGFGLGNLGKAGINKFITTHKCNAVCALLDLD--------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4ZME.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 774 -2896 -3.74 -16.94
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -3.74
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.417

(partial model without unconserved sides chains):
PDB file : Tito_4ZME.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZME-query.scw
PDB file : Tito_Scwrl_4ZME.pdb: