Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceTGNKYIEKRAIDLSRERDPNFFDNPGIPVPECFWFMFKNNVRQDDGTCYSSWKMDMKVGPNWVHIKSDDNCNLSGDFPPGWIVLGKKRPGF
2GPF Chain:A ((30-40))---------------------------------------------------------------------------EIPQGWRAAGK-----


General information:
TITO was launched using:
RESULT:

Template: 2GPF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2 -919 -459.25 -83.50
target 2D structure prediction score : 1.00
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -459.25
2D Compatibility (Sec. Struct. Predict.) : 1.00
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.764

(partial model without unconserved sides chains):
PDB file : Tito_2GPF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GPF-query.scw
PDB file : Tito_Scwrl_2GPF.pdb: