Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAYQLPTVWQDEASNQGAFTGLNRPTAGARFEQNLPKGEQAFQLYSLGTPNGVKVTILLEELLEAGFKEAAYDLYKIAIMDGDQFGSDFVKLNPNSKIPALLDQSGTEDVRVFESAHILLYLAEKFGAFLPSNPVEKVEVLNWLFWQAGAAPFLGGGFGHFFNYAPEKLEYPINRFTMEVKRQLDLLDKELAQKPYIAGNDYTIADIAIWSWYGQLVQGNLYQGSAKFLDASSYQNLVKWAEKIANRPAVKRGLEVTYTEIK
4ECJ Chain:A ((6-205))--------------------------------------------LYTAATPNGHKVSIALEEM------GLPYRVHALSFDKKEQKAPEFLRINPNGRIPAIVDRD-NDDFAVFESGAILIYLAEKTGQLMPADVKGRSRVIQWLMFQMGGVGPMQGQANVFFRYFPEKLQGAIDRYQHETRRLYEVLDGRLGEAEYLAG-DYSIADIATYPW----VRIHDWSGVA----VDGLDNLQRWIAAIEARPAVQRGLLVPRR---


General information:
TITO was launched using:
RESULT:

Template: 4ECJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 952 -113043 -118.74 -565.22
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -118.74
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.378

(partial model without unconserved sides chains):
PDB file : Tito_4ECJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ECJ-query.scw
PDB file : Tito_Scwrl_4ECJ.pdb: