Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIALFYMGGTFGCI-GEPLAPMPYDQFLPQLEKVIPPHLTVDC----FAAPNIVDSSACTAPDWLRLIQRIQQLQLEGYQHFVVIHGTDTLSYAAATLARFLGQS-CHIVITGSQYPLLNIQGDNTREFTDAIENLYLALEQVIALLVGAYLAFHHQVFHAQTALKTHTTELDAFS-----------GLSSNVEFTPQQN--ELIVQDAQIEKAASFQLLNWMMQPIATQHLVQQLRHLLPAPPHFLVLQGFGTGNIAV-NDEFLATLDELYTRGCVPI-LATQVTFGGID-QRYAISTWAKTAKIVINDAHSHADLYAKALQIYLKYPTPEQWLNHWNENLH
4Q0M Chain:A ((1-286))MMKILLIGMGGTIASVKGEN----GYEASL-SVKEVLDIAGIKDCEDCDFLDLKNVDSTLIQPEDWVDLAETLYK-NVKKYDGIIVTHGTDTLAYTSSMISFMLRNPPIPIVFTGSMIPA-------TEENSDAPLNLQTAIKFATSGIRGVYVAFNGKVMLGVRTSKVRTMSRDAFESINYPIIAELRGEDLVVNFIPKFNNGEVTLDLRHDPKVLVIKLIPGLSGDI--------FRAAVELGYRGIVIEGYGAGGIPYRGSDLLQTIEELSKE--IPIVMTTQAMYDGVDLTRYKVGRLALRAGVI------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4Q0M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1418 -21957 -15.48 -83.17
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -15.48
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.356

(partial model without unconserved sides chains):
PDB file : Tito_4Q0M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q0M-query.scw
PDB file : Tito_Scwrl_4Q0M.pdb: