Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSFEQKPKVTVILANLGTPDEATVPAVRRFLKQFLSDPRVIEIPKFIWWIILNLFVLPFRPKRAAHAYASVWSTDSPMREIVFEQTQRVQAYLERENKQFDLTVLPAMTYGNLGIDAVLEKLSAHPQEHVILLPLFPQYSATSTAPLYDAFAKWIPTQRNLPGL--TIIKDYYQHPMFIQALAESVLAYQEQHGKPEK-----LLMSFHGIPQPYADKGDPYADRCRITAKLVAEALHLKDDEWAISFQSRFGKQEWVKPYTDQLLQDWAKQGVKSVQVLSPAFSADCLETLEELAIQNAE-LFQQAGGGSYAYIPALNSDQAHIDLLAGLVQANLDALTHTLAHR
1HRK Chain:A ((107-327))-------------------------------------------------------------------------------------------------------------------EEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILK-ELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNP-YRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQS--------


General information:
TITO was launched using:
RESULT:

Template: 1HRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 978 -9622 -9.84 -45.17
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -9.84
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_1HRK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HRK-query.scw
PDB file : Tito_Scwrl_1HRK.pdb: