Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTESASGTPTQPSLFVLVKQILILAGFWWIGYLLHQKLG--VPV-S-AGILGMFLLLLCLFFKIIKMDQVAMGATVVL-GELLLFFVPVV---VAVVQYKTLFMTEGWQIVLSIAVGTILVMLSTSLTIHYYNRLKAYLQARKRLQHKHI
5A1S Chain:C ((53-170))-------------------GGFALMFVMGAIFGEIGKRLPIFNKYIGGAPVMIFLVAAYFVYAGIFTQKEIDAISNVMDKSNFLNLFIAVLITGAILSVNRKLLLKSLLGYIPTILAGIVGASLFGIVIGLC-------------------


General information:
TITO was launched using:
RESULT:

Template: 5A1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 173 -29682 -171.57 -282.68
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain C : 0.65

3D Compatibility (PKB) : -171.57
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.65
QMean score : -0.134

(partial model without unconserved sides chains):
PDB file : Tito_5A1S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5A1S-query.scw
PDB file : Tito_Scwrl_5A1S.pdb: