Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLLEKILQSQGFGSRKYCQQLIKNGSVSIDGEVVSDLKKQFSPENFEFSVFGQNYQYREKIYIALRKPQGFECSHHPQHHQSVFSLLPETMIHRGVQAVGRLDQDTTGLLLLTDDGKYLQVLTHPRKHVPKVYHVTTYDPVTPEQIEMLIQGVNLHQEKEVFAATDVALLGTHQLTMTIHQGVYHQVKRMIAAVGNKVEKLHRHQIGQLVLPEIEDGDWVYLSEQEKQLAQNII
2GML Chain:A ((3-163))------------------------------------------------------------VLIALNKPVGIVSTTEDGERDNIVDFVNHS---KRVFPIGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLV--QGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDE--------


General information:
TITO was launched using:
RESULT:

Template: 2GML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 730 -77829 -106.62 -483.41
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -106.62
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.530

(partial model without unconserved sides chains):
PDB file : Tito_2GML.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GML-query.scw
PDB file : Tito_Scwrl_2GML.pdb: