Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATAIENRARQLKNAKRGGYAPTIAKDVNKHKVQKIRRALDEARRYVSELNDETVIFDDQD---ARQKAEGAKAIIEMFEAALSGA
3BKS Chain:A ((42-111))---------------QEGKVVRSVVLDFNDLKISEIELAVTSTADYPAERIDASITIDDNDFYLVATKETSFAALIEQGKVDITG-


General information:
TITO was launched using:
RESULT:

Template: 3BKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 155 3128 20.18 46.69
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 20.18
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.174

(partial model without unconserved sides chains):
PDB file : Tito_3BKS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BKS-query.scw
PDB file : Tito_Scwrl_3BKS.pdb: